STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC27561.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
SFC27986.1
Electron transfer flavoprotein alpha subunit apoprotein.
   0.972
SFD07233.1
Electron transfer flavoprotein alpha subunit apoprotein.
   0.965
SFD23760.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.909
SFC09817.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.899
SFD27802.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.899
SFD27990.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 0.861
SFD27363.1
Hypothetical protein.
  
 
 0.858
SFC58090.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.844
SFC27494.1
Acyl dehydratase.
  
  0.819
SFC27463.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
   0.782
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.