Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFC05407.1 | SFC19491.1 | SAMN04488094_102377 | SAMN04488094_10340 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.620 |
| SFC05407.1 | SFC28831.1 | SAMN04488094_102377 | SAMN04488094_103326 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Thioredoxin reductase (NADPH). | 0.816 |
| SFC05407.1 | SFC63766.1 | SAMN04488094_102377 | SAMN04488094_10768 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 1-Cys peroxiredoxin. | 0.464 |
| SFC05407.1 | SFC77375.1 | SAMN04488094_102377 | SAMN04488094_10946 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glutamate synthase (NADPH) large subunit. | 0.955 |
| SFC05407.1 | gcvP | SAMN04488094_102377 | SAMN04488094_11233 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| SFC19491.1 | SFC05407.1 | SAMN04488094_10340 | SAMN04488094_102377 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.620 |
| SFC19491.1 | SFC28831.1 | SAMN04488094_10340 | SAMN04488094_103326 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Thioredoxin reductase (NADPH). | 0.939 |
| SFC19491.1 | SFC63766.1 | SAMN04488094_10340 | SAMN04488094_10768 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 1-Cys peroxiredoxin. | 0.634 |
| SFC19491.1 | SFC64171.1 | SAMN04488094_10340 | SAMN04488094_10781 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Putative thioredoxin. | 0.426 |
| SFC19491.1 | SFC77375.1 | SAMN04488094_10340 | SAMN04488094_10946 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Glutamate synthase (NADPH) large subunit. | 0.677 |
| SFC19491.1 | SFC81470.1 | SAMN04488094_10340 | SAMN04488094_109195 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Thioredoxin; Belongs to the thioredoxin family. | 0.496 |
| SFC19491.1 | SFD09290.1 | SAMN04488094_10340 | SAMN04488094_11524 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Thioredoxin. | 0.540 |
| SFC19491.1 | SFD25216.1 | SAMN04488094_10340 | SAMN04488094_12336 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Selenophosphate synthase. | 0.542 |
| SFC19491.1 | gcvP | SAMN04488094_10340 | SAMN04488094_11233 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.683 |
| SFC28831.1 | SFC05407.1 | SAMN04488094_103326 | SAMN04488094_102377 | Thioredoxin reductase (NADPH). | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.816 |
| SFC28831.1 | SFC19491.1 | SAMN04488094_103326 | SAMN04488094_10340 | Thioredoxin reductase (NADPH). | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.939 |
| SFC28831.1 | SFC63766.1 | SAMN04488094_103326 | SAMN04488094_10768 | Thioredoxin reductase (NADPH). | 1-Cys peroxiredoxin. | 0.941 |
| SFC28831.1 | SFC64171.1 | SAMN04488094_103326 | SAMN04488094_10781 | Thioredoxin reductase (NADPH). | Putative thioredoxin. | 0.932 |
| SFC28831.1 | SFC66191.1 | SAMN04488094_103326 | SAMN04488094_107153 | Thioredoxin reductase (NADPH). | Hypothetical protein. | 0.879 |
| SFC28831.1 | SFC77375.1 | SAMN04488094_103326 | SAMN04488094_10946 | Thioredoxin reductase (NADPH). | Glutamate synthase (NADPH) large subunit. | 0.874 |
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