STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC36645.1Protein of unknown function DUF58. (297 aa)    
Predicted Functional Partners:
SFC36607.1
MoxR-like ATPase.
  
 0.988
SFC36694.1
N-terminal double-transmembrane domain-containing protein.
 
    0.964
SFC36725.1
Hypothetical protein.
 
     0.964
SFC36577.1
Hypothetical protein.
 
     0.783
SFC92256.1
TIGR02302 family protein.
  
   
 0.767
SFC36762.1
ABC-2 type transport system ATP-binding protein.
       0.586
SFC36789.1
ABC-2 type transport system permease protein.
       0.586
SFD02190.1
Pterin-4-alpha-carbinolamine dehydratase.
   
    0.480
SFC92889.1
Disulphide bond corrector protein DsbC.
  
     0.479
SFC10594.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.