STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC40268.1Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). (256 aa)    
Predicted Functional Partners:
SFC40234.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.962
SFC22365.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.905
SFC40198.1
D-allose transport system substrate-binding protein.
  0.882
SFC69829.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.860
SFC40346.1
Phosphoribulokinase / Uridine kinase family protein.
       0.776
SFC40306.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
  
    0.774
SFC87669.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.753
SFD17451.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.752
SFB77374.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
 
  0.742
SFC40415.1
Erythritol transport system permease protein.
 
  0.738
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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