STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC46023.1Fe-S cluster assembly ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SFC45987.1
Fe-S cluster assembly protein SufD.
 
 0.999
SFC46110.1
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
SFC45883.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.998
SFC04146.1
FeS assembly SUF system protein.
  
 0.966
SFC19491.1
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.913
SFC45918.1
Yip1 domain-containing protein.
     
 0.905
SFC45949.1
Yip1 domain-containing protein.
     
 0.903
SFC23772.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.875
SFB74861.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.874
SFB70307.1
Cysteine desulfuration protein SufE.
 
   0.873
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.