Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC70780.1 | SFC70885.1 | SAMN04488094_10855 | SAMN04488094_10859 | precorrin-6A reductase. | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | 0.998 |
SFC70780.1 | SFC70906.1 | SAMN04488094_10855 | SAMN04488094_10860 | precorrin-6A reductase. | Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase. | 0.999 |
SFC70780.1 | SFC70930.1 | SAMN04488094_10855 | SAMN04488094_10861 | precorrin-6A reductase. | Precorrin-2/cobalt-factor-2 C20-methyltransferase. | 0.989 |
SFC70780.1 | SFC70956.1 | SAMN04488094_10855 | SAMN04488094_10862 | precorrin-6A reductase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.997 |
SFC70780.1 | SFC70980.1 | SAMN04488094_10855 | SAMN04488094_10863 | precorrin-6A reductase. | precorrin-8X methylmutase. | 0.989 |
SFC70780.1 | cbiD | SAMN04488094_10855 | SAMN04488094_10856 | precorrin-6A reductase. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
SFC70780.1 | cobB-2 | SAMN04488094_10855 | SAMN04488094_10858 | precorrin-6A reductase. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.957 |
SFC70780.1 | cobD | SAMN04488094_10855 | SAMN04488094_11484 | precorrin-6A reductase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.771 |
SFC70780.1 | cobQ | SAMN04488094_10855 | SAMN04488094_10847 | precorrin-6A reductase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.962 |
SFC70780.1 | cobS | SAMN04488094_10855 | SAMN04488094_108107 | precorrin-6A reductase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.842 |
SFC70885.1 | SFC70780.1 | SAMN04488094_10859 | SAMN04488094_10855 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | precorrin-6A reductase. | 0.998 |
SFC70885.1 | SFC70906.1 | SAMN04488094_10859 | SAMN04488094_10860 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase. | 0.999 |
SFC70885.1 | SFC70930.1 | SAMN04488094_10859 | SAMN04488094_10861 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Precorrin-2/cobalt-factor-2 C20-methyltransferase. | 0.994 |
SFC70885.1 | SFC70956.1 | SAMN04488094_10859 | SAMN04488094_10862 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.999 |
SFC70885.1 | SFC70980.1 | SAMN04488094_10859 | SAMN04488094_10863 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | precorrin-8X methylmutase. | 0.998 |
SFC70885.1 | cbiD | SAMN04488094_10859 | SAMN04488094_10856 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.983 |
SFC70885.1 | cobB-2 | SAMN04488094_10859 | SAMN04488094_10858 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.935 |
SFC70885.1 | cobD | SAMN04488094_10859 | SAMN04488094_11484 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.930 |
SFC70885.1 | cobQ | SAMN04488094_10859 | SAMN04488094_10847 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.970 |
SFC70885.1 | cobS | SAMN04488094_10859 | SAMN04488094_108107 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.919 |
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