STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC93613.1Xaa-Pro aminopeptidase. (365 aa)    
Predicted Functional Partners:
SFC93550.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   0.893
SFC93573.1
Dipeptide transport system permease protein.
 
    0.852
SFC93596.1
Dipeptide transport system permease protein.
 
     0.851
SFC93528.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.846
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
 
  0.813
SFC93633.1
Dipeptide transport system substrate-binding protein.
 
     0.738
SFC05407.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.735
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.715
SFC96723.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
 0.699
SFC69458.1
N-alpha-acetyl-L-2,4-diaminobutyrate deacetylase.
    
 0.650
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.