Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC26126.1 | SFC90237.1 | SAMN04488094_103246 | SAMN04488094_11130 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.536 |
SFC26126.1 | rpoB | SAMN04488094_103246 | SAMN04488094_12234 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.535 |
SFC90237.1 | SFC26126.1 | SAMN04488094_11130 | SAMN04488094_103246 | RNA polymerase sigma-70 factor, ECF subfamily. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.536 |
SFC90237.1 | SFC90256.1 | SAMN04488094_11130 | SAMN04488094_11131 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.707 |
SFC90237.1 | SFC90275.1 | SAMN04488094_11130 | SAMN04488094_11132 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.702 |
SFC90237.1 | SFC90292.1 | SAMN04488094_11130 | SAMN04488094_11133 | RNA polymerase sigma-70 factor, ECF subfamily. | AAA domain-containing protein. | 0.736 |
SFC90237.1 | SFC90311.1 | SAMN04488094_11130 | SAMN04488094_11134 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.701 |
SFC90237.1 | SFC90332.1 | SAMN04488094_11130 | SAMN04488094_11135 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.701 |
SFC90237.1 | SFC90393.1 | SAMN04488094_11130 | SAMN04488094_11138 | RNA polymerase sigma-70 factor, ECF subfamily. | Exodeoxyribonuclease-5. | 0.496 |
SFC90237.1 | SFC90413.1 | SAMN04488094_11130 | SAMN04488094_11139 | RNA polymerase sigma-70 factor, ECF subfamily. | Toprim domain-containing protein. | 0.482 |
SFC90237.1 | rpoB | SAMN04488094_11130 | SAMN04488094_12234 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.470 |
SFC90237.1 | rpoC | SAMN04488094_11130 | SAMN04488094_12232 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.528 |
SFC90256.1 | SFC90237.1 | SAMN04488094_11131 | SAMN04488094_11130 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.707 |
SFC90256.1 | SFC90275.1 | SAMN04488094_11131 | SAMN04488094_11132 | Hypothetical protein. | Hypothetical protein. | 0.776 |
SFC90256.1 | SFC90292.1 | SAMN04488094_11131 | SAMN04488094_11133 | Hypothetical protein. | AAA domain-containing protein. | 0.774 |
SFC90256.1 | SFC90311.1 | SAMN04488094_11131 | SAMN04488094_11134 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFC90256.1 | SFC90332.1 | SAMN04488094_11131 | SAMN04488094_11135 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFC90256.1 | SFC90393.1 | SAMN04488094_11131 | SAMN04488094_11138 | Hypothetical protein. | Exodeoxyribonuclease-5. | 0.456 |
SFC90256.1 | SFC90413.1 | SAMN04488094_11131 | SAMN04488094_11139 | Hypothetical protein. | Toprim domain-containing protein. | 0.456 |
SFC90275.1 | SFC90237.1 | SAMN04488094_11132 | SAMN04488094_11130 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.702 |
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