STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC91073.1C1q domain-containing protein. (358 aa)    
Predicted Functional Partners:
SFC91026.1
Putative phage tail protein.
 
 
   0.941
SFC90968.1
Phage conserved hypothetical protein BR0599.
 
 
   0.937
SFC90944.1
TIGR02217 family protein.
 
 
   0.887
SFC90991.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
    0.828
SFC90920.1
Phage tail tape measure protein, lambda family.
 
    0.812
SFC90894.1
Hypothetical protein.
       0.762
SFB96465.1
Putative phage tail protein.
 
 
   0.752
SFD20652.1
Putative phage tail protein.
 
 
   0.752
SFB98601.1
Phage conserved hypothetical protein BR0599.
 
 
   0.750
SFC01257.1
Putative phage tail protein.
 
 
   0.750
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.