STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC95930.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (256 aa)    
Predicted Functional Partners:
SFC95859.1
Sugar lactone lactonase YvrE.
 
 
  0.892
SFC95907.1
2-dehydro-3-deoxygalactonokinase.
 
     0.880
SFC95886.1
2-keto-3-deoxy-phosphogalactonate aldolase.
 
    0.826
SFC58090.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.766
SFC77375.1
Glutamate synthase (NADPH) large subunit.
     
 0.765
SFD27363.1
Hypothetical protein.
    
  0.765
SFC50454.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.673
SFC95836.1
Aldose 1-epimerase.
  
 
  0.653
SFC24179.1
Beta-galactosidase.
  
  
  0.636
SFB83865.1
[acyl-carrier-protein] S-malonyltransferase.
 
  0.591
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.