STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC97597.1Uncharacterized alpha/beta hydrolase domain. (353 aa)    
Predicted Functional Partners:
SFC47013.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.553
SFD06749.1
Hypothetical protein.
  
     0.503
SFC93223.1
OmpA-OmpF porin, OOP family.
  
     0.472
SFC97573.1
Acetoin utilization protein AcuC.
       0.465
SFC93132.1
Hypothetical protein.
  
     0.447
SFC04600.1
Hypothetical protein.
  
     0.440
SFC72010.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.