STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD02171.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (402 aa)    
Predicted Functional Partners:
SFB74557.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.980
SFB74572.1
Nitrite reductase (NADH) small subunit.
 
 0.966
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.964
SFB72387.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.947
SFC20036.1
Flavorubredoxin.
 
  
 0.943
SFD27363.1
Hypothetical protein.
    
 0.889
SFB85162.1
Hypothetical protein.
  
 0.879
SFB98390.1
Molybdopterin oxidoreductase Fe4S4 domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.835
SFC26321.1
Dimethylsulfide dehydrogenase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.835
SFD02149.1
16S rRNA (guanine966-N2)-methyltransferase.
       0.818
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.