STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD16755.1Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-). (311 aa)    
Predicted Functional Partners:
SFD16774.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  0.978
SFD16795.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.967
SFD16734.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  0.919
SFB72637.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.907
SFB76536.1
Alpha-1,4-digalacturonate transport system permease protein.
  0.907
SFC24116.1
Multiple sugar transport system permease protein.
  0.907
SFC99131.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.907
SFB77168.1
Multiple sugar transport system permease protein.
  0.904
SFD20375.1
Multiple sugar transport system ATP-binding protein.
  
  0.888
SFB76522.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
  0.884
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.