STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD16977.1Protein of unknown function. (334 aa)    
Predicted Functional Partners:
SFC21431.1
Arylsulfatase.
 
     0.759
SFC98694.1
Hypothetical protein.
 
     0.743
SFD18888.1
Arylsulfatase.
 
     0.739
SFC21398.1
Haloacid dehalogenase-like hydrolase.
  
     0.728
SFC09736.1
HEAT repeat-containing protein.
  
     0.597
SFB70837.1
Tetratricopeptide repeat-containing protein.
  
     0.596
SFB77121.1
Imidazolonepropionase.
  
     0.543
SFB76965.1
Protein of unknown function.
  
     0.531
SFC76792.1
Protein of unknown function.
  
     0.529
SFB76952.1
Protein of unknown function.
  
     0.503
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.