STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD20015.1Lactoylglutathione lyase. (131 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
    
 0.868
SFD27363.1
Hypothetical protein.
     
 0.864
SFC58090.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.803
SFC47088.1
methylmalonyl-CoA mutase.
    
 0.776
SFD19091.1
(R)-ethylmalonyl-CoA mutase.
    
 0.776
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.731
SFD20173.1
Propane monooxygenase reductase subunit.
  
 
 0.715
SFD27316.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.635
SFC72350.1
Hypothetical protein.
   
    0.628
SFD20035.1
NAD+-dependent secondary alcohol dehydrogenase Adh1.
 
     0.563
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.