STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD21798.1Signal transduction histidine kinase. (488 aa)    
Predicted Functional Partners:
SFB83229.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.985
SFD21774.1
Two-component system, OmpR family, response regulator.
  0.978
SFC62166.1
Hpt sensor hybrid histidine kinase.
 
0.954
SFC26360.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
  
0.951
SFC26126.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.949
SFD21816.1
Putative membrane protein.
 
     0.924
SFC09711.1
PAS domain S-box-containing protein.
 
 
0.907
SFC86943.1
Two component transcriptional regulator, winged helix family.
  0.905
SFC87977.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
0.901
pdhA-2
2-oxoisovalerate dehydrogenase E1 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.891
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.