STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD29652.1Phage terminase, large subunit GpA. (603 aa)    
Predicted Functional Partners:
SFD29672.1
Hypothetical protein.
 
     0.933
SFD29616.1
Phage portal protein, lambda family.
 
    0.853
SFB97019.1
Phage portal protein, lambda family.
 
  
 0.794
SFC90661.1
Phage portal protein, lambda family.
 
  
 0.794
SFD29597.1
Mu-like prophage major head subunit gpT.
    0.793
SFC44922.1
Phage portal protein, lambda family.
 
    0.782
SFB94340.1
Phage portal protein, lambda family.
 
    0.777
SFD20921.1
Phage portal protein, lambda family.
 
    0.777
SFB98991.1
Phage portal protein, lambda family.
 
    0.776
SFD29578.1
Hypothetical protein.
 
     0.708
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.