STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD30226.1Glycosyl transferase family 2. (368 aa)    
Predicted Functional Partners:
SFD30170.1
Acyl-CoA dehydrogenase.
 
     0.950
SFD30186.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
     0.950
SFD30207.1
Nodulation protein S (NodS).
 
    0.947
SFD30151.1
Glycosyl transferases group 1.
 
    0.832
SFD30131.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.822
SFD30247.1
Ferritin-like metal-binding protein YciE.
 
     0.799
SFD30117.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.797
SFD13495.1
Acyl-CoA dehydrogenase.
 
     0.789
SFC21329.1
Glycosyltransferase, GT2 family.
 
     0.675
SFC21291.1
Glycosyl transferase family 1.
 
     0.637
Your Current Organism:
Tropicimonas isoalkanivorans
NCBI taxonomy Id: 441112
Other names: DSM 19548, JCM 14837, T. isoalkanivorans, Tropicimonas isoalkanivorans Harwati et al. 2009, alpha proteobacterium B51, strain B51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.