Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB85986.1 | SFD05516.1 | SAMN04488094_101794 | SAMN04488094_11430 | Cytochrome c oxidase subunit 2. | Sulfur dehydrogenase subunit SoxD. | 0.997 |
SFB85986.1 | SFD24648.1 | SAMN04488094_101794 | SAMN04488094_1234 | Cytochrome c oxidase subunit 2. | Nitrogen fixation protein FixH. | 0.511 |
SFB85986.1 | SFD24704.1 | SAMN04488094_101794 | SAMN04488094_1237 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 4. | 0.834 |
SFB85986.1 | SFD24721.1 | SAMN04488094_101794 | SAMN04488094_1238 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 2. | 0.891 |
SFB85986.1 | SFD24739.1 | SAMN04488094_101794 | SAMN04488094_1239 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.892 |
SFB85986.1 | SFD32065.1 | SAMN04488094_101794 | SAMN04488094_1326 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.987 |
SFB85986.1 | SFD32119.1 | SAMN04488094_101794 | SAMN04488094_1328 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 2. | 0.891 |
SFB85986.1 | SFD32146.1 | SAMN04488094_101794 | SAMN04488094_1329 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.892 |
SFC35486.1 | SFD24648.1 | SAMN04488094_10486 | SAMN04488094_1234 | Hypothetical protein. | Nitrogen fixation protein FixH. | 0.512 |
SFC35486.1 | SFD24663.1 | SAMN04488094_10486 | SAMN04488094_1235 | Hypothetical protein. | Cytochrome c oxidase accessory protein FixG. | 0.999 |
SFC35486.1 | SFD24704.1 | SAMN04488094_10486 | SAMN04488094_1237 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 4. | 0.966 |
SFC35486.1 | SFD24721.1 | SAMN04488094_10486 | SAMN04488094_1238 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 2. | 0.837 |
SFC35486.1 | SFD24739.1 | SAMN04488094_10486 | SAMN04488094_1239 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.815 |
SFC35486.1 | SFD32065.1 | SAMN04488094_10486 | SAMN04488094_1326 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.968 |
SFC35486.1 | SFD32119.1 | SAMN04488094_10486 | SAMN04488094_1328 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 2. | 0.837 |
SFC35486.1 | SFD32146.1 | SAMN04488094_10486 | SAMN04488094_1329 | Hypothetical protein. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.815 |
SFD05516.1 | SFB85986.1 | SAMN04488094_11430 | SAMN04488094_101794 | Sulfur dehydrogenase subunit SoxD. | Cytochrome c oxidase subunit 2. | 0.997 |
SFD05516.1 | SFD24648.1 | SAMN04488094_11430 | SAMN04488094_1234 | Sulfur dehydrogenase subunit SoxD. | Nitrogen fixation protein FixH. | 0.445 |
SFD05516.1 | SFD24721.1 | SAMN04488094_11430 | SAMN04488094_1238 | Sulfur dehydrogenase subunit SoxD. | Cytochrome c oxidase cbb3-type subunit 2. | 0.851 |
SFD05516.1 | SFD24739.1 | SAMN04488094_11430 | SAMN04488094_1239 | Sulfur dehydrogenase subunit SoxD. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.826 |
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