Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFP14448.1 | SFP14501.1 | SAMN04488047_1035 | SAMN04488047_1037 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Photosynthetic reaction center L subunit. | 0.479 |
| SFP14448.1 | SFP14527.1 | SAMN04488047_1035 | SAMN04488047_1038 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.479 |
| SFP14448.1 | SFP14548.1 | SAMN04488047_1035 | SAMN04488047_1039 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | Photosynthetic reaction center cytochrome c subunit. | 0.479 |
| SFP14448.1 | SFP50881.1 | SAMN04488047_1035 | SAMN04488047_107161 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | DNA ligase-1. | 0.621 |
| SFP14448.1 | SFP90181.1 | SAMN04488047_1035 | SAMN04488047_11751 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | DNA topoisomerase-1. | 0.782 |
| SFP14448.1 | SFQ21671.1 | SAMN04488047_1035 | SAMN04488047_15212 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | ATP-dependent DNA ligase. | 0.792 |
| SFP14448.1 | ku | SAMN04488047_1035 | SAMN04488047_1036 | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.993 |
| SFP14501.1 | SFP14448.1 | SAMN04488047_1037 | SAMN04488047_1035 | Photosynthetic reaction center L subunit. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.479 |
| SFP14501.1 | SFP14527.1 | SAMN04488047_1037 | SAMN04488047_1038 | Photosynthetic reaction center L subunit. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.996 |
| SFP14501.1 | SFP14548.1 | SAMN04488047_1037 | SAMN04488047_1039 | Photosynthetic reaction center L subunit. | Photosynthetic reaction center cytochrome c subunit. | 0.999 |
| SFP14501.1 | ku | SAMN04488047_1037 | SAMN04488047_1036 | Photosynthetic reaction center L subunit. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.479 |
| SFP14527.1 | SFP14448.1 | SAMN04488047_1038 | SAMN04488047_1035 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.479 |
| SFP14527.1 | SFP14501.1 | SAMN04488047_1038 | SAMN04488047_1037 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit. | 0.996 |
| SFP14527.1 | SFP14548.1 | SAMN04488047_1038 | SAMN04488047_1039 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center cytochrome c subunit. | 0.999 |
| SFP14527.1 | ku | SAMN04488047_1038 | SAMN04488047_1036 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.479 |
| SFP14548.1 | SFP14448.1 | SAMN04488047_1039 | SAMN04488047_1035 | Photosynthetic reaction center cytochrome c subunit. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.479 |
| SFP14548.1 | SFP14501.1 | SAMN04488047_1039 | SAMN04488047_1037 | Photosynthetic reaction center cytochrome c subunit. | Photosynthetic reaction center L subunit. | 0.999 |
| SFP14548.1 | SFP14527.1 | SAMN04488047_1039 | SAMN04488047_1038 | Photosynthetic reaction center cytochrome c subunit. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.999 |
| SFP14548.1 | ku | SAMN04488047_1039 | SAMN04488047_1036 | Photosynthetic reaction center cytochrome c subunit. | DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.479 |
| SFP50881.1 | SFP14448.1 | SAMN04488047_107161 | SAMN04488047_1035 | DNA ligase-1. | ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module. | 0.621 |
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