STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP61667.1Dipeptide transport system substrate-binding protein. (530 aa)    
Predicted Functional Partners:
SFP61690.1
Dipeptide transport system permease protein.
  0.937
SFP61710.1
Dipeptide transport system permease protein.
  0.935
SFP61762.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.919
SFP61738.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.916
SFP92524.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.844
SFP91106.1
Peptide/nickel transport system permease protein.
 
  0.589
SFP92504.1
Peptide/nickel transport system permease protein.
 
  0.571
SFO94615.1
Binding-protein-dependent transport system inner membrane component.
 
  0.565
SFO94637.1
Peptide/nickel transport system permease protein.
  
  0.561
SFP63414.1
Oligopeptide transport system substrate-binding protein.
 
 
 
0.555
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.