STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP76872.16-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. (316 aa)    
Predicted Functional Partners:
SFO93998.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
 
 0.957
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
 
 0.936
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.918
SFP08870.1
Fructose-bisphosphate aldolase.
  
 
 0.914
SFP94527.1
Transcriptional regulator, DeoR family.
 
  
 0.909
SFP18558.1
Transcriptional regulator, DeoR family.
 
  
 0.904
SFP19828.1
Fructokinase.
  
 
 0.894
SFP27852.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.893
SFP72890.1
Fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase.
  
  
 0.885
SFO82503.1
Phosphocarrier protein.
  
 
 0.870
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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