Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO82503.1 | SFO93998.1 | SAMN04488047_10113 | SAMN04488047_101541 | Phosphocarrier protein. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.931 |
SFO82503.1 | SFP27852.1 | SAMN04488047_10113 | SAMN04488047_104189 | Phosphocarrier protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.530 |
SFO82503.1 | SFP76872.1 | SAMN04488047_10113 | SAMN04488047_112101 | Phosphocarrier protein. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.870 |
SFO82503.1 | pgi | SAMN04488047_10113 | SAMN04488047_104160 | Phosphocarrier protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.663 |
SFO82503.1 | tal | SAMN04488047_10113 | SAMN04488047_103143 | Phosphocarrier protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.570 |
SFO93998.1 | SFO82503.1 | SAMN04488047_101541 | SAMN04488047_10113 | PTS IIA-like nitrogen-regulatory protein PtsN. | Phosphocarrier protein. | 0.931 |
SFO93998.1 | SFP18558.1 | SAMN04488047_101541 | SAMN04488047_103173 | PTS IIA-like nitrogen-regulatory protein PtsN. | Transcriptional regulator, DeoR family. | 0.491 |
SFO93998.1 | SFP19828.1 | SAMN04488047_101541 | SAMN04488047_103229 | PTS IIA-like nitrogen-regulatory protein PtsN. | Fructokinase. | 0.536 |
SFO93998.1 | SFP27852.1 | SAMN04488047_101541 | SAMN04488047_104189 | PTS IIA-like nitrogen-regulatory protein PtsN. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.417 |
SFO93998.1 | SFP76872.1 | SAMN04488047_101541 | SAMN04488047_112101 | PTS IIA-like nitrogen-regulatory protein PtsN. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.957 |
SFO93998.1 | SFP94527.1 | SAMN04488047_101541 | SAMN04488047_12037 | PTS IIA-like nitrogen-regulatory protein PtsN. | Transcriptional regulator, DeoR family. | 0.572 |
SFO93998.1 | pgi | SAMN04488047_101541 | SAMN04488047_104160 | PTS IIA-like nitrogen-regulatory protein PtsN. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.454 |
SFP08870.1 | SFP27852.1 | SAMN04488047_102268 | SAMN04488047_104189 | Fructose-bisphosphate aldolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.936 |
SFP08870.1 | SFP72890.1 | SAMN04488047_102268 | SAMN04488047_111139 | Fructose-bisphosphate aldolase. | Fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase. | 0.891 |
SFP08870.1 | SFP76872.1 | SAMN04488047_102268 | SAMN04488047_112101 | Fructose-bisphosphate aldolase. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.914 |
SFP08870.1 | pgi | SAMN04488047_102268 | SAMN04488047_104160 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.891 |
SFP08870.1 | tal | SAMN04488047_102268 | SAMN04488047_103143 | Fructose-bisphosphate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.945 |
SFP18558.1 | SFO93998.1 | SAMN04488047_103173 | SAMN04488047_101541 | Transcriptional regulator, DeoR family. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.491 |
SFP18558.1 | SFP76872.1 | SAMN04488047_103173 | SAMN04488047_112101 | Transcriptional regulator, DeoR family. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.904 |
SFP19828.1 | SFO93998.1 | SAMN04488047_103229 | SAMN04488047_101541 | Fructokinase. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.536 |
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