STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP80012.1Sulfotransferase family protein. (272 aa)    
Predicted Functional Partners:
SFP79992.1
Core-2/I-Branching enzyme.
 
 
 0.960
SFO94063.1
Glycosyl transferase family 2.
 
 
 0.873
SFO94088.1
Glycosyl transferase family 2.
 
 
 0.872
SFO94192.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.852
SFP08066.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.843
SFP08037.1
Capsular polysaccharide transport system permease protein.
 
     0.779
SFO94022.1
Hypothetical protein.
 
     0.777
SFO87537.1
Hypothetical protein.
  
     0.775
SFP33348.1
Hypothetical protein.
  
     0.775
SFP51501.1
Hypothetical protein.
  
     0.775
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.