STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ20200.1Alcohol dehydrogenase, propanol-preferring. (350 aa)    
Predicted Functional Partners:
SFP18145.1
Hypothetical protein.
  
 0.978
SFO93236.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.956
SFP23258.1
Cytochrome P450.
  
 0.875
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.795
SFP42086.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
   
  0.720
SFO85601.1
Alkane 1-monooxygenase.
     
 0.706
SFO92043.1
Alkane 1-monooxygenase.
     
 0.706
SFP66511.1
Short chain enoyl-CoA hydratase.
 
 
 0.699
SFQ20219.1
Hypothetical protein.
 
     0.696
SFP59878.1
Cytochrome c, mono-and diheme variants.
   
 
  0.694
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.