STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ24464.1Methyltransferase domain-containing protein. (267 aa)    
Predicted Functional Partners:
SFQ24486.1
Transcriptional regulator, HxlR family.
 
     0.827
SFO93872.1
2-octaprenyl-6-methoxyphenol hydroxylase.
     
 0.789
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.714
SFO85437.1
2-octaprenyl-6-methoxyphenol hydroxylase.
     
 0.706
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
0.636
SFP03811.1
phosphatidylethanolamine/phosphatidyl-N- methylethanolamine N-methyltransferase.
  
     0.597
SFP24123.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
     
 0.572
SFP23258.1
Cytochrome P450.
    
 0.554
SFP88424.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
     
 0.538
SFP56061.1
Cytochrome P450.
    
 0.522
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.