STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ25605.1Sulphur transport. (361 aa)    
Predicted Functional Partners:
SFQ25585.1
Hypothetical protein.
 
     0.727
SFP56130.1
tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family.
  
  
 0.558
SFP75819.1
Hypothetical protein.
  
    0.488
SFP51133.1
Hypothetical protein.
  
     0.457
SFP16849.1
Hypothetical protein.
  
    0.440
SFO88105.1
Transcriptional regulator, ArsR family.
 
     0.408
Your Current Organism:
Tranquillimonas alkanivorans
NCBI taxonomy Id: 441119
Other names: DSM 19547, JCM 14836, T. alkanivorans, Tranquillimonas alkanivorans Harwati et al. 2008, alpha proteobacterium A34, strain A34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.