Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG454_02095 | BG454_05695 | GCA_001870665_00808 | GCA_001870665_00054 | Unannotated protein. | Unannotated protein. | 0.921 |
BG454_02095 | hemH | GCA_001870665_00808 | GCA_001870665_03076 | Unannotated protein. | Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.741 |
BG454_02095 | hemN | GCA_001870665_00808 | GCA_001870665_01350 | Unannotated protein. | Unannotated protein; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.941 |
BG454_02095 | hemN-2 | GCA_001870665_00808 | GCA_001870665_03008 | Unannotated protein. | Unannotated protein; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.941 |
BG454_02910 | BG454_03000 | GCA_001870665_00642 | GCA_001870665_00624 | Unannotated protein. | Unannotated protein. | 0.989 |
BG454_02910 | BG454_05695 | GCA_001870665_00642 | GCA_001870665_00054 | Unannotated protein. | Unannotated protein. | 0.903 |
BG454_02910 | bchI | GCA_001870665_00642 | GCA_001870665_00625 | Unannotated protein. | Unannotated protein; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.992 |
BG454_02910 | hemH | GCA_001870665_00642 | GCA_001870665_03076 | Unannotated protein. | Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.916 |
BG454_03000 | BG454_02910 | GCA_001870665_00624 | GCA_001870665_00642 | Unannotated protein. | Unannotated protein. | 0.989 |
BG454_03000 | BG454_05695 | GCA_001870665_00624 | GCA_001870665_00054 | Unannotated protein. | Unannotated protein. | 0.905 |
BG454_03000 | bchI | GCA_001870665_00624 | GCA_001870665_00625 | Unannotated protein. | Unannotated protein; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.999 |
BG454_03000 | hemH | GCA_001870665_00624 | GCA_001870665_03076 | Unannotated protein. | Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.932 |
BG454_05695 | BG454_02095 | GCA_001870665_00054 | GCA_001870665_00808 | Unannotated protein. | Unannotated protein. | 0.921 |
BG454_05695 | BG454_02910 | GCA_001870665_00054 | GCA_001870665_00642 | Unannotated protein. | Unannotated protein. | 0.903 |
BG454_05695 | BG454_03000 | GCA_001870665_00054 | GCA_001870665_00624 | Unannotated protein. | Unannotated protein. | 0.905 |
BG454_05695 | BG454_05700 | GCA_001870665_00054 | GCA_001870665_00055 | Unannotated protein. | Unannotated protein. | 0.952 |
BG454_05695 | bchI | GCA_001870665_00054 | GCA_001870665_00625 | Unannotated protein. | Unannotated protein; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.903 |
BG454_05695 | coxB | GCA_001870665_00054 | GCA_001870665_00053 | Unannotated protein. | Unannotated protein. | 0.914 |
BG454_05695 | ctaD | GCA_001870665_00054 | GCA_001870665_00052 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.907 |
BG454_05695 | hemH | GCA_001870665_00054 | GCA_001870665_03076 | Unannotated protein. | Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.922 |
page 1 of 3