STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsPUnannotated protein; Belongs to the PEP-utilizing enzyme family. (748 aa)    
Predicted Functional Partners:
BG454_08505
Unannotated protein.
  
 
 
 0.951
BG454_06220
Unannotated protein; Belongs to the aspartokinase family.
     
 0.809
BG454_10665
Unannotated protein.
  
   
 0.809
BG454_08500
Unannotated protein.
  
   
 0.690
BG454_08490
Unannotated protein.
  
     0.637
BG454_05710
Unannotated protein.
  
   0.553
BG454_06240
Unannotated protein.
 
     0.475
BG454_11825
Unannotated protein; Belongs to the UPF0262 family.
  
     0.468
rnr
Unannotated protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
     0.415
BG454_11245
Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
     0.402
Your Current Organism:
Rhodobaca barguzinensis
NCBI taxonomy Id: 441209
Other names: DSM 19920, R. barguzinensis, Rhodobaca barguzinensis Boldareva et al. 2009, VKM B-2406, strain alga-05, strain alga05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.