STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG454_01985Unannotated protein. (269 aa)    
Predicted Functional Partners:
BG454_01705
Unannotated protein; Belongs to the ParB family.
 
 
 0.742
BG454_12750
Unannotated protein.
  
     0.654
BG454_06635
Unannotated protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.641
BG454_00975
Unannotated protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.641
BG454_00970
Unannotated protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.641
BG454_07090
Unannotated protein.
    
 
 0.632
ftsZ
Unannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.622
BG454_01990
Unannotated protein; Belongs to the bacterial ribosomal protein bL31 family.
  
    0.605
rplS
Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
       0.576
flhA
Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
    0.567
Your Current Organism:
Rhodobaca barguzinensis
NCBI taxonomy Id: 441209
Other names: DSM 19920, R. barguzinensis, Rhodobaca barguzinensis Boldareva et al. 2009, VKM B-2406, strain alga-05, strain alga05
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.