Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG454_05345 | ureA | GCA_001870665_01118 | GCA_001870665_01121 | Unannotated protein. | Unannotated protein; Belongs to the urease gamma subunit family. | 0.768 |
BG454_05345 | ureB | GCA_001870665_01118 | GCA_001870665_01120 | Unannotated protein. | Unannotated protein; Belongs to the urease beta subunit family. | 0.768 |
BG454_05345 | ureC | GCA_001870665_01118 | GCA_001870665_01119 | Unannotated protein. | Unannotated protein. | 0.768 |
BG454_05345 | ureD | GCA_001870665_01118 | GCA_001870665_01122 | Unannotated protein. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.762 |
BG454_05345 | ureE | GCA_001870665_01118 | GCA_001870665_01117 | Unannotated protein. | Unannotated protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.773 |
BG454_05345 | ureF | GCA_001870665_01118 | GCA_001870665_01116 | Unannotated protein. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.773 |
BG454_05345 | ureG | GCA_001870665_01118 | GCA_001870665_01115 | Unannotated protein. | Unannotated protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.773 |
BG454_05345 | xth | GCA_001870665_01118 | GCA_001870665_01123 | Unannotated protein. | Unannotated protein. | 0.425 |
ureA | BG454_05345 | GCA_001870665_01121 | GCA_001870665_01118 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein. | 0.768 |
ureA | ureB | GCA_001870665_01121 | GCA_001870665_01120 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein; Belongs to the urease beta subunit family. | 0.999 |
ureA | ureC | GCA_001870665_01121 | GCA_001870665_01119 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein. | 0.999 |
ureA | ureD | GCA_001870665_01121 | GCA_001870665_01122 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.994 |
ureA | ureE | GCA_001870665_01121 | GCA_001870665_01117 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.987 |
ureA | ureF | GCA_001870665_01121 | GCA_001870665_01116 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.994 |
ureA | ureG | GCA_001870665_01121 | GCA_001870665_01115 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.996 |
ureA | xth | GCA_001870665_01121 | GCA_001870665_01123 | Unannotated protein; Belongs to the urease gamma subunit family. | Unannotated protein. | 0.428 |
ureB | BG454_05345 | GCA_001870665_01120 | GCA_001870665_01118 | Unannotated protein; Belongs to the urease beta subunit family. | Unannotated protein. | 0.768 |
ureB | ureA | GCA_001870665_01120 | GCA_001870665_01121 | Unannotated protein; Belongs to the urease beta subunit family. | Unannotated protein; Belongs to the urease gamma subunit family. | 0.999 |
ureB | ureC | GCA_001870665_01120 | GCA_001870665_01119 | Unannotated protein; Belongs to the urease beta subunit family. | Unannotated protein. | 0.999 |
ureB | ureD | GCA_001870665_01120 | GCA_001870665_01122 | Unannotated protein; Belongs to the urease beta subunit family. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.996 |
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