Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG454_07550 | BG454_07685 | GCA_001870665_01287 | GCA_001870665_01314 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
BG454_07685 | BG454_07550 | GCA_001870665_01314 | GCA_001870665_01287 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.910 |
BG454_07685 | BG454_09750 | GCA_001870665_01314 | GCA_001870665_01728 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.910 |
BG454_07685 | BG454_11390 | GCA_001870665_01314 | GCA_001870665_02058 | Unannotated protein. | Unannotated protein. | 0.911 |
BG454_07685 | BG454_15490 | GCA_001870665_01314 | GCA_001870665_02882 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.910 |
BG454_07685 | BG454_18380 | GCA_001870665_01314 | GCA_001870665_03338 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.910 |
BG454_07685 | accC | GCA_001870665_01314 | GCA_001870665_01583 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.915 |
BG454_07685 | gatB | GCA_001870665_01314 | GCA_001870665_02457 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.992 |
BG454_07685 | gatC | GCA_001870665_01314 | GCA_001870665_01600 | Unannotated protein. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.984 |
BG454_07685 | nthA | GCA_001870665_01314 | GCA_001870665_02954 | Unannotated protein. | Unannotated protein. | 0.921 |
BG454_07685 | nthB | GCA_001870665_01314 | GCA_001870665_02953 | Unannotated protein. | Unannotated protein; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family. | 0.919 |
BG454_09750 | BG454_07685 | GCA_001870665_01728 | GCA_001870665_01314 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
BG454_11390 | BG454_07685 | GCA_001870665_02058 | GCA_001870665_01314 | Unannotated protein. | Unannotated protein. | 0.911 |
BG454_15490 | BG454_07685 | GCA_001870665_02882 | GCA_001870665_01314 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
BG454_18380 | BG454_07685 | GCA_001870665_03338 | GCA_001870665_01314 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.910 |
accC | BG454_07685 | GCA_001870665_01583 | GCA_001870665_01314 | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Unannotated protein. | 0.915 |
gatB | BG454_07685 | GCA_001870665_02457 | GCA_001870665_01314 | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | Unannotated protein. | 0.992 |
gatB | gatC | GCA_001870665_02457 | GCA_001870665_01600 | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.999 |
gatC | BG454_07685 | GCA_001870665_01600 | GCA_001870665_01314 | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | Unannotated protein. | 0.984 |
gatC | gatB | GCA_001870665_01600 | GCA_001870665_02457 | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.999 |
page 1 of 2