BG454_09180 protein (Rhodobaca barguzinensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

BG454_09180

Unannotated protein. (435 aa)

Predicted Functional Partners:

BG454_09185

0.999

BG454_18375

0.997

BG454_09175

0.993

potA-3

0.991

BG454_16075

0.981

BG454_18360

0.955

BG454_08900

0.933

BG454_18370

0.924

BG454_02230

0.912

BG454_02225

0.820

Your Current Organism:

Rhodobaca barguzinensis

NCBI taxonomy Id: 441209
Other names: DSM 19920, R. barguzinensis, Rhodobaca barguzinensis Boldareva et al. 2009, VKM B-2406, strain alga-05, strain alga05

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BG454_02225	BG454_02230	GCA_001870665_00781	GCA_001870665_00780	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.999
BG454_02225	BG454_08900	GCA_001870665_00781	GCA_001870665_01557	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.986
BG454_02225	BG454_09180	GCA_001870665_00781	GCA_001870665_01611	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.820
BG454_02225	BG454_09185	GCA_001870665_00781	GCA_001870665_01612	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.978
BG454_02225	BG454_16075	GCA_001870665_00781	GCA_001870665_02997	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.996
BG454_02225	BG454_18360	GCA_001870665_00781	GCA_001870665_03334	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.490
BG454_02225	BG454_18370	GCA_001870665_00781	GCA_001870665_03336	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.867
BG454_02225	BG454_18375	GCA_001870665_00781	GCA_001870665_03337	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein.	0.902
BG454_02225	potA-3	GCA_001870665_00781	GCA_001870665_01609	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.553
BG454_02230	BG454_02225	GCA_001870665_00780	GCA_001870665_00781	Unannotated protein.	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.999
BG454_02230	BG454_09175	GCA_001870665_00780	GCA_001870665_01610	Unannotated protein.	Unannotated protein.	0.462
BG454_02230	BG454_09180	GCA_001870665_00780	GCA_001870665_01611	Unannotated protein.	Unannotated protein.	0.912
BG454_02230	BG454_16075	GCA_001870665_00780	GCA_001870665_02997	Unannotated protein.	Unannotated protein.	0.916
BG454_02230	BG454_18360	GCA_001870665_00780	GCA_001870665_03334	Unannotated protein.	Unannotated protein.	0.635
BG454_02230	BG454_18370	GCA_001870665_00780	GCA_001870665_03336	Unannotated protein.	Unannotated protein.	0.921
BG454_02230	potA-3	GCA_001870665_00780	GCA_001870665_01609	Unannotated protein.	Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.674
BG454_08900	BG454_02225	GCA_001870665_01557	GCA_001870665_00781	Unannotated protein.	Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.986
BG454_08900	BG454_09175	GCA_001870665_01557	GCA_001870665_01610	Unannotated protein.	Unannotated protein.	0.462
BG454_08900	BG454_09180	GCA_001870665_01557	GCA_001870665_01611	Unannotated protein.	Unannotated protein.	0.933
BG454_08900	BG454_18360	GCA_001870665_01557	GCA_001870665_03334	Unannotated protein.	Unannotated protein.	0.554