Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG454_08930 | BG454_08935 | GCA_001870665_01562 | GCA_001870665_01563 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.996 |
BG454_08930 | BG454_12515 | GCA_001870665_01562 | GCA_001870665_02283 | Unannotated protein. | Unannotated protein. | 0.902 |
BG454_08930 | BG454_17600 | GCA_001870665_01562 | GCA_001870665_03307 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.858 |
BG454_08930 | accA | GCA_001870665_01562 | GCA_001870665_02902 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.799 |
BG454_08930 | fabD | GCA_001870665_01562 | GCA_001870665_02371 | Unannotated protein. | Unannotated protein. | 0.989 |
BG454_08930 | fabG | GCA_001870665_01562 | GCA_001870665_01963 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.947 |
BG454_08930 | fabH | GCA_001870665_01562 | GCA_001870665_02319 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.777 |
BG454_08930 | fabZ | GCA_001870665_01562 | GCA_001870665_02347 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.973 |
BG454_08935 | BG454_08930 | GCA_001870665_01563 | GCA_001870665_01562 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.996 |
BG454_08935 | BG454_12515 | GCA_001870665_01563 | GCA_001870665_02283 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.986 |
BG454_08935 | accA | GCA_001870665_01563 | GCA_001870665_02902 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.862 |
BG454_08935 | fabD | GCA_001870665_01563 | GCA_001870665_02371 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.999 |
BG454_08935 | fabG | GCA_001870665_01563 | GCA_001870665_01963 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.962 |
BG454_08935 | fabH | GCA_001870665_01563 | GCA_001870665_02319 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.993 |
BG454_08935 | fabZ | GCA_001870665_01563 | GCA_001870665_02347 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.957 |
BG454_11210 | BG454_12825 | GCA_001870665_02021 | GCA_001870665_02346 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.955 |
BG454_11210 | BG454_17600 | GCA_001870665_02021 | GCA_001870665_03307 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.404 |
BG454_11210 | accA | GCA_001870665_02021 | GCA_001870665_02902 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.511 |
BG454_11210 | fabD | GCA_001870665_02021 | GCA_001870665_02371 | Unannotated protein. | Unannotated protein. | 0.402 |
BG454_11210 | fabZ | GCA_001870665_02021 | GCA_001870665_02347 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.972 |
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