Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BG454_07280 | BG454_15335 | GCA_001870665_01234 | GCA_001870665_02851 | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | Unannotated protein. | 0.949 |
BG454_07280 | BG454_15340 | GCA_001870665_01234 | GCA_001870665_02852 | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | Unannotated protein. | 0.938 |
BG454_07280 | BG454_15345 | GCA_001870665_01234 | GCA_001870665_02853 | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.911 |
BG454_07280 | mdh | GCA_001870665_01234 | GCA_001870665_01689 | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.916 |
BG454_15330 | BG454_15335 | GCA_001870665_02850 | GCA_001870665_02851 | Unannotated protein. | Unannotated protein. | 0.616 |
BG454_15330 | BG454_15340 | GCA_001870665_02850 | GCA_001870665_02852 | Unannotated protein. | Unannotated protein. | 0.613 |
BG454_15330 | BG454_15345 | GCA_001870665_02850 | GCA_001870665_02853 | Unannotated protein. | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.533 |
BG454_15330 | BG454_15350 | GCA_001870665_02850 | GCA_001870665_02854 | Unannotated protein. | Unannotated protein. | 0.473 |
BG454_15335 | BG454_07280 | GCA_001870665_02851 | GCA_001870665_01234 | Unannotated protein. | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.949 |
BG454_15335 | BG454_15330 | GCA_001870665_02851 | GCA_001870665_02850 | Unannotated protein. | Unannotated protein. | 0.616 |
BG454_15335 | BG454_15340 | GCA_001870665_02851 | GCA_001870665_02852 | Unannotated protein. | Unannotated protein. | 0.994 |
BG454_15335 | BG454_15345 | GCA_001870665_02851 | GCA_001870665_02853 | Unannotated protein. | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.986 |
BG454_15335 | BG454_15350 | GCA_001870665_02851 | GCA_001870665_02854 | Unannotated protein. | Unannotated protein. | 0.705 |
BG454_15335 | BG454_15375 | GCA_001870665_02851 | GCA_001870665_02859 | Unannotated protein. | Unannotated protein. | 0.516 |
BG454_15335 | BG454_16925 | GCA_001870665_02851 | GCA_001870665_03169 | Unannotated protein. | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | 0.693 |
BG454_15335 | BG454_17005 | GCA_001870665_02851 | GCA_001870665_03186 | Unannotated protein. | Unannotated protein. | 0.900 |
BG454_15335 | BG454_17790 | GCA_001870665_02851 | GCA_001870665_03462 | Unannotated protein. | Unannotated protein. | 0.552 |
BG454_15335 | mdh | GCA_001870665_02851 | GCA_001870665_01689 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.900 |
BG454_15340 | BG454_07280 | GCA_001870665_02852 | GCA_001870665_01234 | Unannotated protein. | Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.938 |
BG454_15340 | BG454_15330 | GCA_001870665_02852 | GCA_001870665_02850 | Unannotated protein. | Unannotated protein. | 0.613 |
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