STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114472008E3 ubiquitin/ISG15 ligase TRIM25-like. (557 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.713
LOC114459850
Growth arrest-specific protein 7-like.
    
  0.589
LOC114464319
Growth arrest-specific protein 7-like.
    
  0.589
gas7
Growth arrest specific 7.
    
  0.589
pten
Phosphatase and tensin homolog.
    
  0.583
LOC114475174
polyubiquitin-C.
    
  0.576
ENSGWIP00000032604
Ubiquitin B.
    
  0.576
DDX41
DEAD-box helicase 41.
    
  0.565
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.533
sting1
Stimulator of interferon response cGAMP interactor 1.
   
  0.521
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.