STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpm1Zinc finger protein, FOG family member 1. (1313 aa)    
Predicted Functional Partners:
gata5
GATA binding protein 5.
   
 0.870
gata6
GATA binding protein 6.
   
 0.870
LOC114458045
Transcription factor GATA-4-like.
   
 0.870
ENSGWIP00000054334
annotation not available
    
  0.851
RBBP4
Histone-binding protein RBBP4-like.
    
 0.846
LOC114454938
Histone-binding protein RBBP7-like.
    
 0.846
LOC114456459
Histone-binding protein RBBP4.
    
 0.846
GATA2
GATA binding protein 2.
    
 0.822
LOC114463159
GATA-binding factor 2-like.
    
 0.822
gata3
GATA binding protein 3.
    
 0.822
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.