STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfip11Tuftelin interacting protein 11. (840 aa)    
Predicted Functional Partners:
LOC114468384
Protein BUD31 homolog.
    
 0.998
xab2
XPA binding protein 2.
   
 0.997
prpf8
pre-mRNA processing factor 8.
    
 0.996
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.996
cdc40
Cell division cycle 40.
   
 0.996
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.995
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.995
LOC114480198
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1.
   
 0.995
rbm22
RNA binding motif protein 22.
   
 0.994
snrpg
Small nuclear ribonucleoprotein polypeptide G.
    
 0.994
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.