STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114470899Ubiquitin-conjugating enzyme E2-17 kDa-like. (265 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 0.979
anapc11
Anaphase promoting complex subunit 11.
    
 0.951
LOC114475174
polyubiquitin-C.
   
 0.945
rps27a
Ribosomal protein S27a.
   
 0.935
stub1
STIP1 homology and U-box containing protein 1.
   
 0.930
fancm
FA complementation group M.
    
 0.924
pex12
Peroxisomal biogenesis factor 12.
    
 0.909
fancl
FA complementation group L.
    
 0.909
anapc4
Anaphase promoting complex subunit 4.
    
 0.908
cdc16
Cell division cycle 16.
    
 0.905
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.