STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odc1Ornithine decarboxylase 1. (459 aa)    
Predicted Functional Partners:
oaz1
Ornithine decarboxylase antizyme 1.
    
 0.970
LOC114473523
Ornithine decarboxylase antizyme 2-like.
    
 0.967
ENSGWIP00000028134
annotation not available
    
 0.967
LOC114465670
Ornithine decarboxylase antizyme 2-like.
    
 0.947
srm
Spermidine synthase.
  
 0.946
arg2
Arginase 2.
  
 
 0.923
agmat
Agmatinase.
  
 
 0.923
oat
Ornithine aminotransferase.
  
 
 0.917
ASS1
Argininosuccinate synthase 1.
  
 
 0.913
aass
Aminoadipate-semialdehyde synthase.
  
 
 0.907
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.