STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114469444Lysine-specific demethylase 2B-like. (776 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
   
 0.999
rnf2
Ring finger protein 2.
    
 0.997
yaf2
YY1 associated factor 2.
    
 0.990
rybp
RING1 and YY1 binding protein.
    
 0.990
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.965
setd7
SET domain containing 7, histone lysine methyltransferase.
   
 0.965
LOC114480850
Lysine-specific demethylase 6B-like.
   
 0.964
kdm6a
Lysine demethylase 6A.
   
 0.964
LOC114475321
Lysine-specific demethylase 6B-like.
   
 0.964
PCGF3
Polycomb group ring finger 3.
   
 0.961
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.