ENSGWIP00000011342 protein (Gouania willdenowi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGWIP00000011342

annotation not available (289 aa)

Predicted Functional Partners:

ENSGWIP00000017647

0.777

LOC114477012

0.777

lrit3

0.777

lrit1

0.777

PTK7

0.768

ntrk3

0.725

MUSK

0.725

ntrk1

0.725

ntrk2

0.725

LOC114464460

0.725

Your Current Organism:

Gouania willdenowi

NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGWIP00000011342	ENSGWIP00000017647	ENSGWIP00000011342	ENSGWIP00000017647	annotation not available	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	0.777
ENSGWIP00000011342	LOC114464460	ENSGWIP00000011342	ENSGWIP00000024624	annotation not available	NT-3 growth factor receptor-like.	0.725
ENSGWIP00000011342	LOC114477012	ENSGWIP00000011342	ENSGWIP00000044746	annotation not available	Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.	0.777
ENSGWIP00000011342	MUSK	ENSGWIP00000011342	ENSGWIP00000004302	annotation not available	Muscle associated receptor tyrosine kinase.	0.725
ENSGWIP00000011342	PTK7	ENSGWIP00000011342	ENSGWIP00000038677	annotation not available	Protein tyrosine kinase 7 (inactive).	0.768
ENSGWIP00000011342	lrit1	ENSGWIP00000011342	ENSGWIP00000051076	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.777
ENSGWIP00000011342	lrit3	ENSGWIP00000011342	ENSGWIP00000047176	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.777
ENSGWIP00000011342	ntrk1	ENSGWIP00000011342	ENSGWIP00000020902	annotation not available	Neurotrophic receptor tyrosine kinase 1.	0.725
ENSGWIP00000011342	ntrk2	ENSGWIP00000011342	ENSGWIP00000022692	annotation not available	Neurotrophic receptor tyrosine kinase 2.	0.725
ENSGWIP00000011342	ntrk3	ENSGWIP00000011342	ENSGWIP00000002088	annotation not available	Neurotrophic receptor tyrosine kinase 3.	0.725
ENSGWIP00000017647	ENSGWIP00000011342	ENSGWIP00000017647	ENSGWIP00000011342	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	annotation not available	0.777
ENSGWIP00000017647	LOC114464460	ENSGWIP00000017647	ENSGWIP00000024624	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	NT-3 growth factor receptor-like.	0.672
ENSGWIP00000017647	LOC114477012	ENSGWIP00000017647	ENSGWIP00000044746	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.	0.740
ENSGWIP00000017647	MUSK	ENSGWIP00000017647	ENSGWIP00000004302	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Muscle associated receptor tyrosine kinase.	0.672
ENSGWIP00000017647	PTK7	ENSGWIP00000017647	ENSGWIP00000038677	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Protein tyrosine kinase 7 (inactive).	0.958
ENSGWIP00000017647	lrit1	ENSGWIP00000017647	ENSGWIP00000051076	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.747
ENSGWIP00000017647	lrit3	ENSGWIP00000017647	ENSGWIP00000047176	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.745
ENSGWIP00000017647	ntrk1	ENSGWIP00000017647	ENSGWIP00000020902	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Neurotrophic receptor tyrosine kinase 1.	0.672
ENSGWIP00000017647	ntrk2	ENSGWIP00000017647	ENSGWIP00000022692	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Neurotrophic receptor tyrosine kinase 2.	0.672
ENSGWIP00000017647	ntrk3	ENSGWIP00000017647	ENSGWIP00000002088	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.	Neurotrophic receptor tyrosine kinase 3.	0.672