STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (200 aa)    
Predicted Functional Partners:
LOC114474993
Protocadherin-16-like.
   
 0.581
tmie
Transmembrane inner ear.
     
 0.560
CIB2
Calcium and integrin-binding family member 2-like.
   
 
 0.552
LOC114465872
Calcium and integrin-binding family member 2-like.
   
 
 0.552
cib3
Calcium and integrin binding family member 3.
   
 
 0.552
LOC114475510
Protocadherin-16-like.
   
 0.541
dchs2
Dachsous cadherin-related 2.
   
 0.536
phactr2
Phosphatase and actin regulator 2.
     
 0.500
LOC114480523
5-hydroxytryptamine receptor 2C-like.
      
 0.491
ENSGWIP00000024822
annotation not available
   
 0.476
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.