STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114464771Tryptophan 5-hydroxylase 2-like. (493 aa)    
Predicted Functional Partners:
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
 0.966
pcbd1
Pterin-4 alpha-carbinolamine dehydratase 1.
  
 0.966
got2
Glutamic-oxaloacetic transaminase 2.
  
 
 0.897
qdpr
Quinoid dihydropteridine reductase.
   
 0.893
tat
Tyrosine aminotransferase.
   
 
 0.887
tdo2
Tryptophan 2,3-dioxygenase.
  
 
 0.878
LOC114469728
Indoleamine 2,3-dioxygenase 2-like.
   
 
 0.876
LOC114477238
Indoleamine 2,3-dioxygenase 2-like.
   
 
 0.876
ddc
Dopa decarboxylase.
   
 0.864
hdc
Histidine decarboxylase.
   
 0.864
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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