STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybbp1aMYB binding protein 1a. (1268 aa)    
Predicted Functional Partners:
gart
annotation not available
   
  
 0.983
utp4
UTP4 small subunit processome component.
   
 0.980
polr1a
RNA polymerase I subunit A.
   
 0.980
wdr43
WD repeat domain 43.
   
 0.978
wdr75
WD repeat domain 75.
   
 0.976
eed
Periodic tryptophan protein 2 homolog.
   
 
 0.972
pdcd11
Programmed cell death 11.
   
 
 0.971
nol6
Nucleolar protein 6.
   
 
 0.971
nat10
N-acetyltransferase 10.
   
 
  0.967
wdr46
WD repeat domain 46.
   
 
  0.966
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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