STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1144789955-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase. (530 aa)    
Predicted Functional Partners:
lss
Lanosterol synthase.
  
 0.966
hsd3b7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7.
  
 0.958
LOC114473656
Cholesterol 25-hydroxylase-like protein 2.
  
 0.944
ENSGWIP00000034304
Cholesterol 25-hydroxylase like 1, tandem duplicate 2.
  
 0.944
msmo1
Methylsterol monooxygenase 1.
  
 0.944
faxdc2
Fatty acid hydroxylase domain containing 2.
  
 0.944
sqle
Squalene epoxidase.
  
 0.915
hsd3b1
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1.
  
 0.913
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.907
sdr42e1
Short chain dehydrogenase/reductase family 42E, member 1.
  
 0.902
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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