STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RELREL proto-oncogene, NF-kB subunit. (586 aa)    
Predicted Functional Partners:
nfkbia
NFKB inhibitor alpha.
   
 0.956
LOC114457535
NF-kappa-B inhibitor alpha-like.
   
 0.956
nfkbie
NFKB inhibitor epsilon.
   
 0.949
rps3
Ribosomal protein S3.
    
 0.943
kpna4
Karyopherin subunit alpha 4.
    
  0.942
kpna3
Karyopherin subunit alpha 3.
    
  0.942
kpna1
Karyopherin subunit alpha 1.
    
 0.913
sirt1
Sirtuin 1.
    
 0.912
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.901
LOC114476848
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.901
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.