STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114481869Lysine-specific demethylase 4A-like. (370 aa)    
Predicted Functional Partners:
LOC114459859
Histone H3.3.
    
 0.679
LOC114474203
Histone H3.3.
    
 0.679
LOC114481098
Histone H3.3.
    
 0.679
ENSGWIP00000020617
annotation not available
    
 0.679
ENSGWIP00000020651
annotation not available
    
 0.679
ENSGWIP00000022628
annotation not available
    
 0.679
ENSGWIP00000022643
annotation not available
    
 0.679
LOC114473106
Histone H3.3-like.
    
 0.679
ENSGWIP00000025752
annotation not available
    
 0.679
H3-3B
Histone H3.3.
    
 0.679
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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