STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd9Potassium channel tetramerization domain containing 9. (389 aa)    
Predicted Functional Partners:
top2b
DNA topoisomerase II beta.
   
 
 0.914
top2a
DNA topoisomerase II alpha.
   
 
 0.914
mocs1
Molybdenum cofactor synthesis 1.
  
 
  0.866
hddc3
HD domain containing 3.
    
  0.859
kmt5b
Lysine methyltransferase 5B.
    
  0.826
LOC114468468
Uncharacterized LOC114468468.
    
  0.826
rad50
RAD50 double strand break repair protein.
    
  0.811
LOC114464455
Pyruvate kinase PKM-like.
   
 0.782
ENSGWIP00000015952
annotation not available
   
 0.782
ENSGWIP00000015955
annotation not available
   
 0.782
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.