STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114475848Ankyrin repeat domain-containing protein SOWAHA-like. (356 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81.
    
 0.812
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.805
ift88
Intraflagellar transport 88.
   
 0.772
ift52
Intraflagellar transport 52.
    
 0.767
ift57
Intraflagellar transport 57.
    
 0.753
ift80
Intraflagellar transport 80.
    
 0.737
ttc26
Tetratricopeptide repeat domain 26.
    
  0.721
cluap1
Clusterin associated protein 1.
    
  0.714
rps3
Ribosomal protein S3.
    
 0.713
traf3ip1
TRAF3 interacting protein 1.
    
  0.696
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.