STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP1SURP and G-patch domain-containing protein 1-like. (624 aa)    
Predicted Functional Partners:
rbm17
RNA binding motif protein 17.
   
 
 0.951
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.936
LOC114480198
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1.
   
 0.936
u2af2
U2 small nuclear RNA auxiliary factor 2.
    
 
 0.886
LOC114467809
Splicing factor U2AF 65 kDa subunit-like.
    
 
 0.886
LOC114463507
RNA-binding protein 6-like.
   
 0.877
LOC114463254
RNA-binding protein 5-like.
   
0.877
LOC114466994
RNA-binding protein 10-like.
   
 0.877
LOC114476921
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
   
 0.816
dhx32
DEAH-box helicase 32 (putative).
   
 0.816
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.